CDS

Accession Number TCMCG057C24855
gbkey CDS
Protein Id XP_018492320.1
Location join(16013535..16013750,16013831..16014004,16014076..16014399,16014472..16016223,16016308..16016646)
Gene LOC108862628
GeneID 108862628
Organism Raphanus sativus

Protein

Length 934aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636818.1
Definition PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Zinc-finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20179        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04138        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0000323        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005769        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005884        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006887        [VIEW IN EMBL-EBI]
GO:0006904        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007040        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008333        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0030139        [VIEW IN EMBL-EBI]
GO:0030674        [VIEW IN EMBL-EBI]
GO:0030897        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031338        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032388        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033263        [VIEW IN EMBL-EBI]
GO:0034058        [VIEW IN EMBL-EBI]
GO:0035542        [VIEW IN EMBL-EBI]
GO:0042144        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060090        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080171        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0097576        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0140029        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1901998        [VIEW IN EMBL-EBI]
GO:1902115        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903364        [VIEW IN EMBL-EBI]
GO:1903649        [VIEW IN EMBL-EBI]
GO:1903651        [VIEW IN EMBL-EBI]
GO:2000641        [VIEW IN EMBL-EBI]
GO:2000643        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACCAGTGGAGGAAATTCGAATTCTTCGAGGAGAAATACGGAGGCAAGATACCTGAAGACGTCACCGGAGAGATACAATGCTGTTCAAGTGGCCGTGGCAAAGTCGTCATCGGCTCCAGTGACGGATCCGTCAGCTTCCTCGATCGCGGTATCAAGTTCGATTCCGGTTTCCAAGCTCACTCTTCCTCCGTCCTCTTCCTTCAGCATCTCAAGCAAAGGAACTTCCTGGTGACGGTGGGAGAAGATGAACAGATATCGCCGCAGCAGTCAGGGATGTGCCTGAAGGTATTTGACCTCGACAAAGCGCAGGAGGAAAGCACGAGCTCCTCTGCTCCCGATTGCATTGGTATCTTAAGAATATTCACCAATCAGTTTCCTGAAGCTAAGATTACTTCTTTTCTTGTCCTGGAGGAAGTTCCACCGATATTGCTCATAGCCATTGGCTTAGATAATGGCTGTATTTATTGTGTGAAAGGAGACATTGCACGAGAGCGTATCACCAGGTTTAAGCTTCAAGTAGACGGAGTTTCAGACAAAAGACAAACCCCTATCACAGGCTTGGGATTCAGGCTTGATGGTCTGTCGCTTCTGTTGTTTGCTGTAACTCCTGACTCGGTCAACTCGTTTGCTATGCAAGCGCAGCCTCCTAGAGTGCAGACGTTGGATCATATTGGGAGTGGTGTCAATACTGTTACTATGAGTGACCGTTCGGAATTGATTGTTGGTCGACCTGAAGCTGTTTATTTCTATGAAGTTGATGGACGTGGTCCTTGCTGGGCTTTTGAAGGAGAGAAGAAGTTCATGGGGTGGTTCCGTGGCTACCTTCTATGTGTCATCGCTGATCCTAAAACTGGGACCAACGTTTTCAATGTCTACGACCTCAGGAATCGACTTATAGCGTATAGCCTGGTCGTTGATAAAGTCTCCAACATGCTCTGCGAGTGGGGAAATGTAATACTTATAACGGCTGACAAGTCATTGCTGTGCGTTGCGGAGAAAGATATGGAGAGCAAGTTAGATATGCTGTTCAAGAAAAACCTCTACACTGTGGCGATCAATCTTGTCCAGAGTCAGCATGCCGATGCCGCTGCTACTGCCAATGTGATGAGGAAGTATGGAGATCACTTGTATGGCAAACAAGATTATGACGAAGCTATGTCTCAGTACATCAACACGATTGGTCATCTTGAACCATCGTTCGTGATACAGAAGTTTCTGGATGCACAGAGGATCTACAATCTTACTAATTACCTGGAGAAATTGCATGAGAAGGGTCTAGCATCAAAAGACCACACAACTCTTTTGCTAAACTGTTATACTAAACTGAAGGATGTAGAAAAGCTTAACACGTTCATCAGGAAGGAAGATGGGATCGGCGAGCTCAAGTTTGATGTGGAAACAGCCATCAGGGTCTGTCGTGCAGCTAACTACCACGAGCATGCGATGTATGTTGCGAAAAAGGCAGGAAAACACGAGTGGTATTTGAAAATTTTGCTTGAGGATCTTGGAAACTACGACGAAGCCTTGCAGTATATTTCGAGCCTTGAACCAAGTCAAGCTGGCGTAACAATAAAAGAGTATGGTAAAATCCTTATAGAGCACAAGCCAAAAGAGGCGATAGATATACTAATGCGACTTTGCACCGAGCAAGGAACTTCAAATGGTGTTTACTTGTCCATGTTGCCGTCACCTGTAGACTTCATCAATGTGTTTGTTCAGCATCCACATTCGCTGATGGATTTTCTCGAGAGATATGCTGAAATAGTTAAAGATTCACCTGCTCAAGCAGAAATCAACAACACACTCCTGGAGTTATACTTGTCCAAGGACTTGAACTTTCCATCAATCTCTCTATCAGAAAATGGTCTAGATCAGAATTTCACAGATCATTCAGTAGCAGCTGCAATGTCCAAAACTGGTTCTGGAAAAAAGGAAATTGCTGATTCGAATGATACAATAGAAAAGGATTGTGTGGAAAGACAGCAAAAGGGACTAGAGTTGCTCAAAATAGGCTGGCCATCAGACCAAGAGCAACCACTCTATGATGTTGACCTTGCTATAATTCTTTGTGAGATGAATTCGTTCAAAGAAGGGCTTCTGTATCTGTACGAAAAGATGAAACTTTACAAGGAGGTTATTGCTTGCTACATGCAGAATCATGATCACGAGGGACTGATTGCTTGCTGCAAAAAGTTAGGCGATTCTGGCAAGGGTGGGGATCCGTCTCTCTGGGCAGATCTTCTCAAATATTTTGGTGAAATCGGAGAGGACTGTACTAAAGAGGTGAAGGAGGTTCTTACTTATATTGAACGAGATGATATTTTACCTCCTATAATTGTTCTTCAGACCCTAGCGAAGAATCCATGCCTCACACTCTCTGTAATCAAAGACTATATCGCACGGAAACTTGAACAAGAATCAAAGATAATTGAAGAGGATCGGCGAGCTGTTGAGAAGTATCAGGAAACGACAAAAAACATGAGAAAAGAGATTGAGGACCTTAGGTCAAATGCCAGGATATTTCAACTAAGCAAGTGCACTGCTTGCACTTTCACACTGGATATCCCTGCAGTCCATTTCATGTGTATGCACTCATTCCATCAACGTTGCCTTGGTGACAACGAAACAGAATGTCCCGAGTGTGCTCCCGAGTACAGATCCGTGGTGGAAATGAAGAGAAGTTTGGAGCATAACTCGAAAGACCAAGCTCTGTTCTTCCAGCAGGTAAAGGGCTCGAAAGACGGGTTTTCTGTAATTGCAGAGTATTTTGGGAAAGGAATCATCAGCAAAACTAGTGACTGA
Protein:  
MYQWRKFEFFEEKYGGKIPEDVTGEIQCCSSGRGKVVIGSSDGSVSFLDRGIKFDSGFQAHSSSVLFLQHLKQRNFLVTVGEDEQISPQQSGMCLKVFDLDKAQEESTSSSAPDCIGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGCIYCVKGDIARERITRFKLQVDGVSDKRQTPITGLGFRLDGLSLLLFAVTPDSVNSFAMQAQPPRVQTLDHIGSGVNTVTMSDRSELIVGRPEAVYFYEVDGRGPCWAFEGEKKFMGWFRGYLLCVIADPKTGTNVFNVYDLRNRLIAYSLVVDKVSNMLCEWGNVILITADKSLLCVAEKDMESKLDMLFKKNLYTVAINLVQSQHADAAATANVMRKYGDHLYGKQDYDEAMSQYINTIGHLEPSFVIQKFLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNTFIRKEDGIGELKFDVETAIRVCRAANYHEHAMYVAKKAGKHEWYLKILLEDLGNYDEALQYISSLEPSQAGVTIKEYGKILIEHKPKEAIDILMRLCTEQGTSNGVYLSMLPSPVDFINVFVQHPHSLMDFLERYAEIVKDSPAQAEINNTLLELYLSKDLNFPSISLSENGLDQNFTDHSVAAAMSKTGSGKKEIADSNDTIEKDCVERQQKGLELLKIGWPSDQEQPLYDVDLAIILCEMNSFKEGLLYLYEKMKLYKEVIACYMQNHDHEGLIACCKKLGDSGKGGDPSLWADLLKYFGEIGEDCTKEVKEVLTYIERDDILPPIIVLQTLAKNPCLTLSVIKDYIARKLEQESKIIEEDRRAVEKYQETTKNMRKEIEDLRSNARIFQLSKCTACTFTLDIPAVHFMCMHSFHQRCLGDNETECPECAPEYRSVVEMKRSLEHNSKDQALFFQQVKGSKDGFSVIAEYFGKGIISKTSD